Replication of progressive supranuclear palsy genome-wide association study identifies SLCO1A2 and DUSP10 as new susceptibility loci.

TitleReplication of progressive supranuclear palsy genome-wide association study identifies SLCO1A2 and DUSP10 as new susceptibility loci.
Publication TypeJournal Article
Year of Publication2018
AuthorsSanchez-Contreras MY, Kouri N, Cook CN, Serie DJ, Heckman MG, Finch NCA, Caselli RJ, Uitti RJ, Wszolek ZK, Graff-Radford N, Petrucelli L, San Wang L-, Schellenberg GD, Dickson DW, Rademakers R, Ross OA
JournalMol Neurodegener
Volume13
Issue1
Pagination37
Date Published2018 07 09
ISSN1750-1326
KeywordsAged, Aged, 80 and over, Dual-Specificity Phosphatases, Female, Genetic Predisposition to Disease, Genome-Wide Association Study, Genotype, Humans, Male, Middle Aged, Mitogen-Activated Protein Kinase Phosphatases, Organic Anion Transporters, Polymorphism, Single Nucleotide, Supranuclear Palsy, Progressive
Abstract

BACKGROUND: Progressive supranuclear palsy (PSP) is a parkinsonian neurodegenerative tauopathy affecting brain regions involved in motor function, including the basal ganglia, diencephalon and brainstem. While PSP is largely considered to be a sporadic disorder, cases with suspected familial inheritance have been identified and the common MAPT H1haplotype is a major genetic risk factor. Due to the relatively low prevalence of PSP, large sample sizes can be difficult to achieve, and this has limited the ability to detect true genetic risk factors at the genome-wide statistical threshold for significance in GWAS data. With this in mind, in this study we genotyped the genetic variants that displayed the strongest degree of association with PSP (P<1E-4) in the previous GWAS in a new cohort of 533 pathologically-confirmed PSP cases and 1172 controls, and performed a combined analysis with the previous GWAS data.

RESULTS: Our findings validate the known association of loci at MAPT, MOBP, EIF2AK3 and STX6 with risk of PSP, and uncover novel associations with SLCO1A2 (rs11568563) and DUSP10 (rs6687758) variants, both of which were classified as non-significant in the original GWAS.

CONCLUSIONS: Resolving the genetic architecture of PSP will provide mechanistic insights and nominate candidate genes and pathways for future therapeutic intervention strategies.

DOI10.1186/s13024-018-0267-3
Alternate JournalMol Neurodegener
PubMed ID29986742
PubMed Central IDPMC6038352
Grant ListU54-NS10069 / NS / NINDS NIH HHS / United States
R35 NS097273 / NS / NINDS NIH HHS / United States
NS078086 / NS / NINDS NIH HHS / United States
R01 NS078086 / NS / NINDS NIH HHS / United States
P01 AG017586 / AG / NIA NIH HHS / United States
R35 NS097261 / NS / NINDS NIH HHS / United States
NS072187 / NS / NINDS NIH HHS / United States
R35- NS097261 / NS / NINDS NIH HHS / United States
P50 NS072187 / NS / NINDS NIH HHS / United States
F32 NS010069 / NS / NINDS NIH HHS / United States
P01 AG003949 / AG / NIA NIH HHS / United States
U01 AG006786 / AG / NIA NIH HHS / United States
U54 NS100693 / NS / NINDS NIH HHS / United States